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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015813658.1_cds_XP_016497640.1_11749
CDS Infomation

[gene=LOC107816434] [db_xref=GeneID:107816434] [protein=auxin transporter-like protein 2] [protein_id=XP_016497640.1] [location=join(7613..7774,7869..8054,8465..8577,8670..8853,9287..9384,10569..10776,10881..11138,11468..11737)] [gbkey=CDS]
Sequence

ATGGAATCTTCAGACAAAGTGGTGGAAACAGTGATAGTAGGGAATTATGTCGAGATGGAG
TCTGAAGGGAAGTCTAATAATGACATGAAATCTAAGATCTCTAATTTATTCTGGCATGGT
GGTTCTGCTTATGATGCTTGGTTTAGTTGTGCTTCTAATCAGGTAGCTCAAGTGCTATTG
ACATTGCCATACTCATTTTCTCAACTGGGGATGCTCTCTGGTGTTTCATTTCAACTCTTC
TATGGTTTATTGGGCAGTTGGACAGCTTATCTCATTAGCATACTCTATATTGAGTACAGA
ACCAGAAAAGAAAGAGAAAAAGTTGATTTCCGCAACCACGTCATTCAGTGGTTTGAAGTT
CTTGACGGGTTACTAGGAAAACATTGGAGGAACGTGGGTTTGGCGTTTAATTGCACTTTT
CTTCTGTTTGGATCTGTAATTCAACTTATAGCCTGTGCAAGCAATATATATTACATTAAT
GATAATTTGGACAAAAGAACTTGGACTTATATCTTCGGAGCTTGTTGTGCTACTACTGTC
TTCATTCCCTCTTTCCACAATTATCGAATCTGGTCTTTCCTTGGCTTATTAATGACCACT
TACACTGCTTGGTATCTTACTGTCGCGTCACTCCTTCATGGCCAGGTGGAGGGGGTGAAG
CATTCGGGACCAACAAAATTGGTGCTCTACTTCACAGGAGCAACAAACATTCTCTACACA
TTTGGGGGACATGCCGTTACTGTAGAGGTAATGCACGCGATGTGGAAACCACAAAAATTT
AAGGCAATCTACTTATGGGCAACTCTGTATGTGTTGACACTGACTCTTCCATCAGCAGCA
GCAGTGTATTGGGCATTTGGAGATTTACTTCTTGATCATTCCAATGCCTTTTCTCTGTTA
CCAAAATCACCCTTCAGAGACATGGCTGTCATCCTTATGCTCATTCACCAGTTTATAACA
TTTGGTTTTGCATGCACGCCCTTGTATTTTGTATGGGAGAAAGTTATAGGGATGCACGAG
TGCAAGAGTCTTTGCAAGAGGGCGGCGGCGCGGTTGCCGGTGGTGATTCCGATATGGTTT
TTGGCCATAGTATTCCCATTCTTTGGCCCTATAAACTCCTCTGTTGGTTCACTTCTCGTT
AGTTTCACGGTCTACATTATCCCAGCTCTAGCTCATATGTTCACCTTTAAATCAGCTGCT
GCCCGAGAGAATGCGGTAGAGCAACCACCAAAATTCGTGGGACGCTGGGCTGGAACATTT
ACAATAAACATATTTGTGGTTGTGTGGGTACTGATTGTTGGGTTTGGATTTGGTGGTTGG
GCTAGCATGACCAATTTCATACATCAAATTGACACATTTGGCCTTTTTACCAAATGTTAC
CAATGCCCACCTCCTCCAGGATCTCCACCACCGTTCCTCCCACACGCTGGCGCACCACGG
CCTGCTCCGGCCAACATCACGCACCGTCACCACCTATGA

Peptide Sequence

PEP ID

XP_016497640.1
PEP Infomation

PREDICTED: auxin transporter-like protein 2 [Nicotiana tabacum]
Sequence

MESSDKVVETVIVGNYVEMESEGKSNNDMKSKISNLFWHGGSAYDAWFSCASNQVAQVLL
TLPYSFSQLGMLSGVSFQLFYGLLGSWTAYLISILYIEYRTRKEREKVDFRNHVIQWFEV
LDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTV
FIPSFHNYRIWSFLGLLMTTYTAWYLTVASLLHGQVEGVKHSGPTKLVLYFTGATNILYT
FGGHAVTVEVMHAMWKPQKFKAIYLWATLYVLTLTLPSAAAVYWAFGDLLLDHSNAFSLL
PKSPFRDMAVILMLIHQFITFGFACTPLYFVWEKVIGMHECKSLCKRAAARLPVVIPIWF
LAIVFPFFGPINSSVGSLLVSFTVYIIPALAHMFTFKSAAARENAVEQPPKFVGRWAGTF
TINIFVVVWVLIVGFGFGGWASMTNFIHQIDTFGLFTKCYQCPPPPGSPPPFLPHAGAPR
PAPANITHRHHL

Transcript Sequence

Gene sequence data has not been registered.